Soil spectroscopy tools and reference models


Documentation for package ‘soil.spec’ version 2.1-4

Help Pages

afspec Sample soil spectroscopy data from Africa Sentinel Sites
afss Africa Sentinel Site data (wet chemistry)
afss.spec Africa Sentinel Site data (wet chemistry)
fit Fits a calibration model for soil spectroscopy
fit-method Fits a calibration model for soil spectroscopy
fit.SpectraModel Fits a calibration model for soil spectroscopy
ken.sto Sample selection based on the Kennard-Stone algorithm
m.ALUM3S Fits a calibration model for soil spectroscopy
m.ECAM3S Fits a calibration model for soil spectroscopy
m.EMGM3S Fits a calibration model for soil spectroscopy
m.ENAM3S Fits a calibration model for soil spectroscopy
m.EXB Fits a calibration model for soil spectroscopy
m.EXKM3S Fits a calibration model for soil spectroscopy
m.NITCNS Fits a calibration model for soil spectroscopy
m.ORCCNS Fits a calibration model for soil spectroscopy
m.PHIHOX Fits a calibration model for soil spectroscopy
m.SNDLDF Fits a calibration model for soil spectroscopy
plot Plots spectral signatures
plot-method Plots spectral signatures
plot.ken.sto Sample selection based on the Kennard-Stone algorithm
plot.Spectra Plots spectral signatures
plot.trans Spectral transformation
predict-method Predict soil properties from an object of class '"SpectraPoints"'
predict.SpectraPoints Predict soil properties from an object of class '"SpectraPoints"'
read.opus Reads binary OPUS files containing spectroscopy
read.opus-method Reads binary OPUS files containing spectroscopy
read.spc Reads spectral spc-files into R
reshape.SpectraPoints A class for spectral absorbance measurements
spec.env Soil.spec package specific environmental variables
spec.opts Soil.spec package specific environmental variables
Spectra A class for spectral absorbance measurements
Spectra-class A class for spectral absorbance measurements
spectra.outliers A tool for screening spectral outliers based on Multidimensional Scaling (MDS) approach
SpectraModel Fits a calibration model for soil spectroscopy
SpectraModel-class Fits a calibration model for soil spectroscopy
SpectraPoints A class for spectral absorbance measurements
SpectraPoints-class A class for spectral absorbance measurements
summary-method A class for spectral absorbance measurements
trans Spectral transformation
validate-method A class for spectral absorbance measurements
validate.SpectraPoints A class for spectral absorbance measurements
wavenumbers Standard bands